Best Accounting Shopify apps in 2026 [Updated]
PickYourApp Review Team
6 min read
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Aug 30, 2025
The Best Shopify accounting apps help merchants track profits, manage reports, and streamline bookkeeping tasks. From real-time profit analytics and custom reporting solutions to QuickBooks integration and sales tax automation, these tools provide essential financial insights. Whether you need detailed profit calculations, inventory value tracking, automated data exports, or staff payroll management, these top-rated apps deliver the accounting capabilities needed to make data-driven business decisions and maintain accurate financial records.
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#1. Easily build custom reports and dashboards with metrics to visualize any data from your store.
Create custom reports and dashboards to analyze your store's performance with precision. Mipler helps you build detailed sales, financial, tax, customer, and inventory reports using your store's data points, including metafields and tags. Generate personalized reports with custom columns and calculations that match your business needs. Share reports securely through public links or schedule automated email deliveries in CSV, Excel, or PDF formats. Export data directly to Google Sheets for further analysis. Get real-time support for custom report creation and use the AI Assistant to modify reports or add new data columns. Access comprehensive insights by incorporating tags, metafields, and note attributes into your reporting system.Install from Shopify App Store
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#2. Staff management for Point of Sale retailers. Time tracking, scheduling, commissions, payroll & more
Easyteam is a complete staff management solution designed specifically for Shopify Point of Sale retailers. Track employee time, manage schedules, monitor breaks, and handle sales commissions all from one central platform. The system integrates seamlessly with Shopify POS, making it simple for staff to clock in, check schedules, and complete store checklists right from their terminals. Whether you're managing timesheets, calculating commissions, or running retail payroll, Easyteam works smoothly with both Shopify and Stocky. Access all features from any device, including mobile and POS terminals. With dedicated onboarding support and live assistance, your team can start using Easyteam quickly while maintaining Shopify's familiar user experience.Install from Shopify App Store
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#3. Advanced reporting, using realtime data that you can report, customize, automate, export, and share.
Report Toaster helps Shopify merchants create detailed custom reports using real-time shop data. Choose from over 120 report templates to analyze sales, track inventory history, and monitor performance across multiple stores. Customize your reports by adding columns, applying filters, and sorting data. Group and compare metrics over time, and extract insights from tags and metafields. Share reports easily through automated scheduling - deliver them via email, SMS, or Slack. Export your reports as PDF or CSV files for further analysis in Excel, or share live report links with your team and partners. Whether you need basic sales analytics or complex multi-store reporting, Report Toaster provides the tools to make data-driven decisions for your business.Install from Shopify App Store
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#4. Automate tailored CSV/Excel order, product, customer reports. Full Metafield & line item support.
Export your Shopify data easily with DataChamp's customizable CSV and Excel reports. Create detailed exports of orders, products, customers, and metafields by choosing from over 500 available fields. Set up automated report delivery to Google Drive, FTP, sFTP, Email, or Dropbox on your schedule. The app supports comprehensive filtering, custom columns, calculations, and multiple encoding options including UTF-8, ASCII, and Win-1252. Perfect for accounting needs, ERP system integration, fulfillment tracking, and business analysis. With full metafield and custom attribute support, you'll get complete, accurate data exports formatted exactly how you need them.Install from Shopify App Store
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#5. Automatically sync orders, payout summaries, sales, refunds, taxes, fees & more to Xero & QuickBooks
Simplify your accounting workflow with this smart Xero and QuickBooks integration that automatically syncs your Shopify data. The app creates accurate invoices for sales, fees, and refunds that perfectly match your bank deposits, making reconciliation a one-click process. Track your business performance with detailed COGS reporting and manage your finances across multiple payment gateways and currencies. Customize your experience with flexible ledger mappings, inventory synchronization, and contact management. Whether you're handling tax-inclusive or exclusive transactions, gift cards, or complex fee structures, this integration ensures your financial data flows seamlessly between Shopify and your accounting software. Save time by consolidating multiple payout orders into single, organized invoices while maintaining precise control over your financial records.Install from Shopify App Store
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#6. Sync sales to QuickBooks Desktop in an automated manner - Sync individual orders
QuickBooks Desktop integration that makes order syncing simple and automatic. Sync your Shopify orders, products, and customer data to QuickBooks Desktop or Enterprise editions whenever you want - automatically or manually. Choose between individual order sync for detailed tracking or summary sync for consolidated daily entries. The app creates single entries for Shopify payouts and daily entries for other payment methods, making reconciliation straightforward. Get complete data transfer including customers, products, taxes and all order details without any manual data entry. Perfect for businesses that need reliable QuickBooks Desktop synchronization with their Shopify store.Install from Shopify App Store
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#7. Accounting software + service for ecommerce.Get real-time fully accurate bookkeeping & inventory
Get professional bookkeeping and inventory management for your ecommerce business with Finaloop's accounting software and expert service. Our accountants deliver real-time, tax-ready financial reports including P&L, Cash Flow, and Balance Sheet statements. Track inventory seamlessly with FIFO unit tracking across multiple sales channels, while automated COGS calculations give you accurate financial insights. Access founder-focused dashboards and KPIs anytime to monitor your business performance. Whether your books need organizing or starting from scratch, we provide full historical catch-up service. Try 3 months free with no commitment or credit card required.Install from Shopify App Store
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#8. Save time and stay ahead of your bookkeeping when you integrate with QuickBooks Online International
Connect your Shopify store with QuickBooks Online International to simplify your business accounting. This integration helps you track income, expenses, and tax deductions across multiple Shopify storefronts worldwide. Automatically sync your sales data, customer information, and product details between both platforms, reducing manual data entry and potential errors. Keep your inventory levels accurate by synchronizing stock data between Shopify and QuickBooks Online (Plus or higher). Perfect for merchants selling outside the US who want to maintain organized financial records and streamline their bookkeeping process.Install from Shopify App Store
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#9. Sidr Tax is a US-based fully managed US sales tax solution. Automate your sales tax returns.
Simplify your US sales tax management with Sidr Tax, a comprehensive solution built in the USA. Our automated system handles your complete sales tax compliance journey - from nexus tracking and permit registration to report generation and filing. We create accurate tax reports based on your actual collected sales tax and submit them directly to state websites. Stay compliant with automated filing schedules while our economic nexus dashboard keeps you informed about tax collection requirements. Need assistance? Our responsive support team is available via chat and email to help with your sales tax questions. Let Sidr Tax manage your sales tax obligations so you can focus on growing your business.Install from Shopify App Store
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#10. Helpful pre-made and detailed reporting for all store data. Easily filter, export, and send reports.
Get comprehensive Shopify reporting with Data Export's pre-made templates covering sales, taxes, inventory, POS, payouts, orders, customers, and refunds. The Report Builder lets you preview records, customize fields, and organize data by time periods. Schedule automated report delivery through email, FTP, or Google integration. Export your data in Excel, CSV, or PDF formats with optional password protection. Create exactly the reports you need using advanced filters and column management tools. Free expert support helps you make the most of your store's data reporting capabilities.Install from Shopify App Store