Best ERP Shopify apps in 2026 [Updated]
PickYourApp Review Team
6 min read
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Sep 29, 2025
The best Shopify ERP apps help merchants manage their entire business operations from a single platform. From automated order processing and inventory management to seamless data synchronization across multiple sales channels, these solutions connect critical business functions. Whether you need cloud-based retail management, manufacturing capabilities, or custom data exports, this curated selection of top ERP integrations offers specialized tools for small businesses to enterprise-level operations, helping Shopify merchants scale efficiently while maintaining operational control.
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#1. Fulfil is the only cloud ERP specifically designed for eCommerce and wholesale merchants at scale.
Fulfil is a comprehensive cloud ERP system built specifically for growing eCommerce and wholesale businesses. This integrated platform combines essential business functions including order management across multiple channels, inventory and warehouse control, purchasing automation, and manufacturing processes with BOMs and work orders. The system brings together your operations, financials, and customer service into one unified solution. With built-in reporting tools and a complete RESTful API, Fulfil helps merchants manage their entire business workflow efficiently. Whether you're handling complex manufacturing needs or coordinating multiple warehouses, this ERP solution adapts to your business requirements while maintaining profitability and operational excellence.Install from Shopify App Store
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#2. AI workflow automation for orders, customers, inventory, email, and much more — no coding required.
MESA brings intelligent workflow automation to your Shopify store without requiring any coding skills. Connect and automate tasks across hundreds of apps, ERPs, CRMs, and other business systems through a single, user-friendly interface. Create custom workflows that handle order processing, data synchronization, email communications, and complex multi-step sequences. With advanced logic capabilities and AI-powered actions, MESA goes beyond standard Shopify Flow features to support your growing business needs. Get personalized guidance from automation experts who'll help implement your custom solutions from concept to completion. Access pre-built templates and built-in tools for email, SMS, forms, and approvals to quickly automate your store operations.Install from Shopify App Store
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#3. Streamline your ecom operations, improve accuracy, & drive your business with NetSuite Integration.
Connect your Shopify store with NetSuite through this reliable integration app that automates key business operations. The app enables smooth two-way synchronization of orders, inventory, customers, and product data between platforms. Real-time updates ensure accurate inventory levels and pricing across both systems, while automated order processing and fulfillment keep your operations running efficiently. With robust data security measures and dedicated technical support, this NetSuite integration handles your specific business requirements through customizable features. Get comprehensive assistance for implementation and ongoing operations, making your Shopify-NetSuite connection work seamlessly for your business needs.Install from Shopify App Store
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#4. Sell on Amazon, Temu, Walmart, TikTok Shop… Manage listings, Orders Shipping, and inventory sync.
Manage your multi-channel e-commerce business seamlessly with 4Seller. List products across major platforms including Shopify, TikTok Shop, Temu, Amazon, and Walmart from one central dashboard. Keep your inventory synchronized in real-time across all sales channels to prevent overselling. Process and ship orders efficiently by comparing rates from leading carriers like USPS, UPS, FedEx, and Stamps. The app lets you handle product migration, batch label printing, and order management across Amazon, eBay, Walmart, and other marketplaces. With integrated shipping solutions and Amazon MCF support, you can optimize your fulfillment process while maintaining accurate inventory levels across all platforms.Install from Shopify App Store
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#5. Powerful yet easy-to-use software for precise production planning and efficient inventory management
MRPeasy is a cloud-based manufacturing ERP system designed for small manufacturers and distributors with up to 200 employees. This AI-powered software helps you manage production planning, inventory control, and procurement processes with precision. Calculate product costs and lead times accurately while maintaining real-time stock visibility. The platform seamlessly integrates with Shopify, automatically syncing your inventory and order data between systems. Create and track customer orders, purchase orders, and manufacturing orders in one central location. The built-in Standard Accounting Module handles financials, with optional connections to Xero or QuickBooks. From advanced routing and BOM management to team coordination and scalable operations, MRPeasy delivers comprehensive manufacturing management that grows with your business. Keep production costs in check and prevent stockouts with smart inventory controls and precise planning tools.Install from Shopify App Store
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#6. Pick, pack & ship with our enterprise resource planning system and mobile barcode scanners
Manage your entire e-commerce operations with Pickware's comprehensive enterprise resource planning (ERP) and warehouse management system (WMS). Use mobile barcode scanners to efficiently pick, pack, and ship orders while keeping track of inventory across all channels. The system centralizes data from your Shopify store, marketplaces, and retail locations, making it simple to handle orders, process returns, and maintain stock levels. Print shipping labels automatically, notify customers about shipments, and create invoices with ease. Perfect for businesses looking to coordinate their online and physical store operations through a single, integrated platform.Install from Shopify App Store
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#7. XoroERP is tailored for eCommerce, retail & wholesale, scaling your business seamlessly
XoroERP brings together essential business operations in one complete system for growing eCommerce and wholesale businesses. This integrated platform manages your orders, inventory, warehousing, purchasing, manufacturing, and customer service needs. Perfect for companies that need more than basic accounting software, XoroERP offers real-time inventory tracking across multiple locations, automated payment processing, and seamless order management. The system handles international currencies through Shopify Markets and keeps your gift cards, payouts, and shipping confirmations in sync automatically. With XoroERP, you can scale your retail operations while maintaining accurate control over all business processes.Install from Shopify App Store
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#8. The app integrates with monday.com to sync shops ecommerce data with monday.com
Connect your Shopify store with monday.com to create a seamless workflow for your e-commerce operations. This integration automatically syncs your orders, customers, and inventory data between both platforms, making it easier to manage your business. Track new orders, monitor abandoned carts, and handle refunds directly in monday.com without manual data entry. Keep your product inventory levels up to date and manage customer information efficiently across both systems. Perfect for teams who want to centralize their e-commerce management and improve order fulfillment accuracy while saving time on daily operations.Install from Shopify App Store
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#9. Brightpearl is a Retail Operating System for retailers & wholesalers designed for scale.
Brightpearl's Retail Operating System helps retailers and wholesalers manage their entire post-purchase operations in one place. The system seamlessly integrates with Shopify and Shopify Plus to automate order management, accounting, inventory tracking, warehouse operations, and returns processing. With built-in automation capabilities, merchants can reduce manual tasks and errors while maintaining accurate stock forecasting. The platform provides comprehensive reporting tools for data-driven decisions and adapts to changing market demands through ready-to-use integrations. Retail experts help implement and optimize the system, ensuring businesses have a unified view of transactions and customer data across their operations.Install from Shopify App Store
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#10. Manage sales, products, and manufacturing across multiple locations and channels. Prevent stockouts
Katana's cloud inventory management system gives you real-time control over your stock, manufacturing, and order fulfillment across multiple locations. Track inventory levels, manage kits and bundles, and prevent stockouts with accurate stock monitoring. The platform connects your sales channels, production processes, and accounting software, providing clear visibility of your business operations. Handle purchase orders based on actual material needs, coordinate manufacturing schedules, and fulfill orders efficiently from different locations. With QuickBooks Online and Xero integration, you can keep your financial data synchronized while maintaining optimal inventory levels across your entire business.Install from Shopify App Store